PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20198.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 223aa MW: 25792.1 Da PI: 6.9114

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	87.8	9.2e-28	147	205	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk++++ r+YY+C+s +C+vkk+ver+ +d +++++tYeg+Hnhe PHU20198.1 147 LDDGYKWRKYGKKKVKSNTNLRNYYKCSSGDCKVKKRVERDGNDSSYLITTYEGRHNHE 205 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MFGSSTFQET SNVTSHHYQT INPNFAFHDP LINMNQDHGH NNNKYQDFDT SFLDMLLDGG 60 DQEYYSNYSN NSYNNNVSFY SENPFTQQEI SSSTYSTSGN SSTASSFDAT LTNIHMNHEN 120 SSMGIEKEKK GEKHAIAFRT KTQLEILDDG YKWRKYGKKK VKSNTNLRNY YKCSSGDCKV 180 KKRVERDGND SSYLITTYEG RHNHESPFVI YCHDEMPTSK YLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	1e-24	WRKY family protein