PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20235.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 157aa    MW: 17654.8 Da    PI: 5.9899
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.4e-172366148
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                ++y+GVr+++ +gr++AeIr p++   ++r++lg+++taeeAa a++ 
  PHU20235.1 23 TKYHGVRRRP-WGRYAAEIRNPNT---KQRHWLGTYDTAEEAAFAYDI 66
                69********.**********933...5******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MENITNIPQL HVRNLGRSSR HSTKYHGVRR RPWGRYAAEI RNPNTKQRHW LGTYDTAEEA  60
AFAYDISSIA FCGIENARTN FVYPFPSFPS LYNSPAPPSP PPLSPPPPPP STPELEVFEN  120
NCMEIEMIDN AGDDESLLIA SILQSFCHTN TLDKLAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-26ERF family protein