PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20287.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 159aa    MW: 18546.8 Da    PI: 7.1122
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.13.2e-0939973290
        FAR1 32 tfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                +f+ ++e +++ ++ + +++++r+r e r++C a++k k + ++ wev +++  H+H++ 
  PHU20287.1 39 EFNSKEESYNAYNSYAvARERKRQRLEYRCDCMARIKFKIS-NKIWEVCEFNDVHSHPMI 97
                555556666666655566777889999999****9999999.***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MEDAHVNKGK DSSVQEDFNV NEPNICNTSK NFVFEIGMEF NSKEESYNAY NSYAVARERK  60
RQRLEYRCDC MARIKFKISN KIWEVCEFND VHSHPMIEDN LKHFIHSGRR LTNTTKNILG  120
SMIDAGIHTK KVVRYLQNEA GRVENVGFIE QDAYNFVQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-10FAR1 family protein