PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20318.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 357aa    MW: 39314.9 Da    PI: 5.204
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-20181230255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+  l+g
  PHU20318.1 181 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYMLRG 230
                 59******9.**********965...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MAAAMDFWNS TVPLDLQLSS DPVTSGGELM EALEPFMKSV SPPSTSPVNF PPIFSSPSSD  60
LQSFPSFPPP PNPISYPYTS SFYPTVQPSD DCSTSTEMNS QIFSTGFSSY GMDQQSSSIG  120
LNQLTPTQIE QIQAQINFQI QQQQQQQMMS YHHHASSTMN FLAPKPVHMK QSGSPPKPTK  180
LYRGVRQRHW GKWVAEIRLP KNRTRLWLGT FDTAEEAALA YDKAAYMLRG DFARLNFSNL  240
RHNFGEYNPL HSSVDAKLKD ICQSLAQGKS IDSKKKKTKG SASASAATAA GVVKMEEGES  300
KVVEGGSESD GSGSASGESS PVTELIFPEF TEEESTWNMS ENFLLQKYPS EIDWASI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.17e-52ERF family protein