PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20397.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 270aa    MW: 30637.3 Da    PI: 8.2228
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.21.6e-06112131120
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                 ++C++C+k+F+r  nL+ H+
  PHU20397.1 112 FSCHICHKTFNRYNNLQMHM 131
                 89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEGSYFASSS NVENQIEPYD FFADKTQNAF EFLSLSQPCD NIDKISNDQE NPNWDNNKED  60
DVTVALHIGL PNSSNNIIPT DHHNQGDGNI IGAATQYWIP TPSQILVGFT HFSCHICHKT  120
FNRYNNLQMH MWGHGSQYRK GPESLKGTQP RAMLGIPCYC CEEGCKNNIN HPRAKPLKDF  180
RTLQTHYKRK HGTKRFACRK CGKCLAVKGD WRTHEKNCGK RWLCSCGSDF KHKRSLKDHI  240
ASFGEGHGPC PPTNNSFEGI EVQRAGNFFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-107C2H2 family protein