PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20475.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 209aa MW: 23113.7 Da PI: 10.6904

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	6.3e-10	43	89	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er+RR+riN +++L++l P + +K +K +L++Av +k+L PHU20475.1 43 VTHAVAERKRRERINGHLHTLKKLFPYL-----PKKDKPRVLTEAVTQLKEL 89 68***********************8.....6999999*999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MLSSLQGCNG FLQHQVLVDH QRKNGDGKSS SNTKKNKSKD SAVTHAVAER KRRERINGHL 60 HTLKKLFPYL PKKDKPRVLT EAVTQLKELR KNIAQQLELS SLFIPSENDV VIVNYCDNEE 120 RTVKTTVCCE DRPALNRDIS SAIRSVQGRV VKAEMATVGG RTKAEMVVVL AKANGGEKDV 180 ALLKRALKAV VENRALGLGS SMILGRRFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	54	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	1e-29	bHLH family protein