PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20530.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 321aa    MW: 35134.5 Da    PI: 6.2684
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.27.3e-16223259135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+++  Tp +Rrgpdg++tLCnaCGl+++ kg+
  PHU20530.1 223 CHHCGVSEncTPAMRRGPDGPRTLCNACGLKWANKGT 259
                 **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MRRLPFLYID KSIMIPENPR PLQARPYEDH MHAPLQSEED DEDGGAYEDD GDEETMDEAE  60
DVSMKVLNQR QYGGRGGGGG GGVVQVCRSS ELTLAFEGEV YVFPAVTPDK VQAVLLLLGG  120
CDIPTAVPTV ELPFDKKVED LPKQANPSRR FASLVRFREK RKERCFDKKI RYSVRKEVAQ  180
RMHRKNGQFA SLKSSSGSSS CDSAKSSLEG DGTQQSGTVL GKCHHCGVSE NCTPAMRRGP  240
DGPRTLCNAC GLKWANKGTL RDLSKAARKI SVEPNELGTP DNPVKASAEG SLDHSADVEK  300
KTIVDFGNAS KTELDIPTKF D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17381GGRGGGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.28e-59GATA family protein