PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20704.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 355aa    MW: 39785 Da    PI: 4.6957
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.3e-102803201055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 rrRR+riN+++  L+ l+P+      +K++ +++Le+Av Y+k Lq
  PHU20704.1 280 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVTYVKFLQ 320
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MEHVGAFFDE EWESLSKLFS SNETADFMLQ LQGDHGSLLS MNGCDNAGSG YGTEAFCQLS  60
DDPNNNFQYF SQESSITSCG SDPGMFFTNN SSHEHLQHSN NIDDVNNQLL QVAINNHPDD  120
QSIDYFVVDD KNLENLSINQ DFQTDMTNKE EMICEQLDNA GISPVSNKEM QLKRKLEKVA  180
PENPKKKARG SQDAQKSTKK KAQPKKGKKN QKMTQIDNEE GEEETINADN QIGQSSSCCS  240
SEDDSNASQE LKGGAISSNT KGKSRASRGA ATDPQSLYAR RRRERINERL RILQNLVPNG  300
TKVDISTMLE EAVTYVKFLQ LQIKLLSSDE LWMYAPLAYH GMDIGIYQQM LPHLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.11e-39bHLH family protein