PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20778.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 279aa MW: 31125.1 Da PI: 5.819

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20778.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	92.6	6.5e-29	10	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppG rF P+d++++ +yL +k ++++ l++ + ike+d+y+++P +Lp +++k+w++++ r k g r++ + gyW++ g PHU20778.1 10 LPPGTRFYPSDQQIIRHYLSPKNDADHrndLQF-DLIKEIDLYNFDPLNLPDsarflyGRGGRKKHWFYYVARVLK---GGRRRISGGGGYWRKRGGVM 104 79******************98888543333.67**********95467654223366799999998775...5677678899****** PP NAM 91 evlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128 +v+s+ ++ +vg++k++vfy+g ++++ktdW+m ey+l PHU20778.1 105 DVVSEgaGKGVVGTRKSFVFYSGdCGKNAVKTDWLMYEYAL 145 9777788******995578899*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGDNTALFSL PPGTRFYPSD QQIIRHYLSP KNDADHRNDL QFDLIKEIDL YNFDPLNLPD 60 SARFLYGRGG RKKHWFYYVA RVLKGGRRRI SGGGGYWRKR GGVMDVVSEG AGKGVVGTRK 120 SFVFYSGDCG KNAVKTDWLM YEYALAGHPM ASFVLCRVFI KSHHKNNLSG HIFSSYGEET 180 IAMVRHIGIQ YDGTAALVTD SKMHDENTID QENDVSKLPG GLATDVNGQA VAENVTEQIG 240 FESDRPPFLD GFSVEELMAI EEGDFIELDD LLCPLLGIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	2e-20	NAC family protein