PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20850.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 249aa    MW: 28512.5 Da    PI: 8.3898
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.59.1e-17261081199
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ++ ++  +pk+fa++  +k   +  ++l+ +sg +W+ +l  +  +++ +l++GWkeFv+a+ L+e D ++Fk++g+s+f   v+vf++
  PHU20850.1  26 FNGHIGPFPKNFANNLREK--LEDSVSLTRPSGATWNARL--TLIGDALFLKDGWKEFVDAHSLEEDDLLIFKYNGSSRF--DVSVFDR 108
                 55555568****9555444..5568***************..889999**************************998999..9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MSYWEILDKV ARGVPSAEKP FIEDDFNGHI GPFPKNFANN LREKLEDSVS LTRPSGATWN  60
ARLTLIGDAL FLKDGWKEFV DAHSLEEDDL LIFKYNGSSR FDVSVFDRQS LCEKEVSCFV  120
KKCEHADVAS RSRIKRHTPR EYSSRDVSEA PPTKKPNLAA TPTSEDTSKS SSHDEYEPPP  180
QQKRKHLHRL QHLRTLMNLL HIMSVSPQQK RKLRLLRLQH LEHGVLELMP SCGPRGIKCL  240
CHLVFSIVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-22B3 family protein