PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20856.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 200aa    MW: 22381.9 Da    PI: 6.5162
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.53.1e-1038765899
                EEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 58 ryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                + +l++GWkeFv+a+ L+e D ++Fk++g s+f   v vf++
  PHU20856.1 38 ALFLKDGWKEFVDAHSLEEDDLLIFKYNG-SRF--DVLVFDR 76
                5799**********************988.788..8888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MSIWEILDEV VRGVLSAEKP FIEGDFNGHI GLTLIGDALF LKDGWKEFVD AHSLEEDDLL  60
IFKYNGSRFD VLVFDRQSLC EKEASCFVKK CEHADVASRS RTKRHTPREY SSRDVYEAPP  120
TKKRKLAATP TSEDTSKSFS HDEYEPPAKK KTLASTSTSA DTNESSSHNE CEPPTEKKTT  180
LASTSTSRTR SAQANAKLRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199104RSRTKR
2122151KKRKLAATPTSEDTSKSFSHDEYEPPAKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-17B3 family protein