PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20929.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 663aa MW: 72235.5 Da PI: 5.6921

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.2	8.8e-18	436	486	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr++ +g+WvAeIr+p + r +r +lg+f+ ++Aa a++aa++kl+g PHU20929.1 436 CKYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDNSYDAAVAYDAAALKLYG 486 79***999.******8...3.35***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MPPSPASDAY IREPHKYFDE VVIMVRAGDG GHGAVLSMPN HKAPSKSQGK FDRNKTKKKA 60 SYKRDSNGSI VLPMGGHGGD VVIYADESKD SLLEFHNKSK HKAKRGGNVD SVGVLTSYLQ 120 NGVAAPTLRI PVPLGTVVKL KKGKFLADLA NPGDEVLVAR GGQGGISLLE VPEHKRKQMT 180 TLTANIMRDD TDKVLSFGQP GEEVSLQLIL RVVADVGLVG LPNAGKSTLL AAITHAKPDI 240 ADYPFTTLMP NLGRLDGDPS LGADKYSSEA TLADLPGLIE GAHLGKGLGR NFLRHLRRTR 300 LLIHVVDAAA EDPVGDYRTV KEELRMYNPE YLDRPYLVVL NKIDKPEAID RLPTLTEEIW 360 RIGCERISSE PGRNSELSNT LSAKDQKVKE LEEYPRPLAV VGVSVLPKKQ TQAKLTQATS 420 RKGCMRGKGG PENASCKYKG VRQRTWGKWV AEIREPNRGA RLWLGTFDNS YDAAVAYDAA 480 ALKLYGAEAK LNLPHLYNNP AQAQEEINSN SGPITINPTP APAPAPVVYN VASPSTWSVG 540 NDPSLYFDND YDINSFATSD DPISIDFMGL MDTTDHEEFA EKNNNQISQG LGGEMWTDEK 600 VNNQISQGLG GEMWTDLNML PEIDDSSIWE EAEATTSFQE AVINDPGING CNLDGGINFP 660 PWC

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MPPSPASDAY IREPHKYFDE VVIMVRAGDG GHGAVLSMPN HKAPSKSQGK FDRNKTKKKA  60
SYKRDSNGSI VLPMGGHGGD VVIYADESKD SLLEFHNKSK HKAKRGGNVD SVGVLTSYLQ  120
NGVAAPTLRI PVPLGTVVKL KKGKFLADLA NPGDEVLVAR GGQGGISLLE VPEHKRKQMT  180
TLTANIMRDD TDKVLSFGQP GEEVSLQLIL RVVADVGLVG LPNAGKSTLL AAITHAKPDI  240
ADYPFTTLMP NLGRLDGDPS LGADKYSSEA TLADLPGLIE GAHLGKGLGR NFLRHLRRTR  300
LLIHVVDAAA EDPVGDYRTV KEELRMYNPE YLDRPYLVVL NKIDKPEAID RLPTLTEEIW  360
RIGCERISSE PGRNSELSNT LSAKDQKVKE LEEYPRPLAV VGVSVLPKKQ TQAKLTQATS  420
RKGCMRGKGG PENASCKYKG VRQRTWGKWV AEIREPNRGA RLWLGTFDNS YDAAVAYDAA  480
ALKLYGAEAK LNLPHLYNNP AQAQEEINSN SGPITINPTP APAPAPVVYN VASPSTWSVG  540
NDPSLYFDND YDINSFATSD DPISIDFMGL MDTTDHEEFA EKNNNQISQG LGGEMWTDEK  600
VNNQISQGLG GEMWTDLNML PEIDDSSIWE EAEATTSFQE AVINDPGING CNLDGGINFP  660
PWC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75490.1	3e-36	ERF family protein