PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU21123.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 305aa MW: 33822.9 Da PI: 6.8894

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU21123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25	4e-08	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ ++ +e+++fC ++ lC++C H+ H+ PHU21123.1 4 QCDVCNTNEATFFCVADEAALCNTCDHRVHHAnklagkHQ 43 7****99****************9964446777776 PP
2	zf-B_box	28.7	2.7e-09	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + + C+ ++e ++ lfC++++ lC++C +++Hk Ht PHU21123.1 54 QVPLCDICQERRAFLFCQQDRAILCRECDVSIHKAneHT 92 6789*****************************878865 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MKIQCDVCNT NEATFFCVAD EAALCNTCDH RVHHANKLAG KHQRFSLLQP SAKQVPLCDI 60 CQERRAFLFC QQDRAILCRE CDVSIHKANE HTQKHNRFLL TGVTISTNSS LYTSSESPSV 120 TSSTTNQDSA TNVNKSQTCN KKPLPLPVSV SGSVSSSIIA QEVSVAANIG ENGYTSSISE 180 YLEMLPGWHV EEFLNCSTIP TNGFCKIGDN DVFPIWDTEI ESTLNSFSPE SIGIWVPQAP 240 PAPPPQKNQN QIFPQNINFG GQIEFKNSKE VTCNKSSRKW RDDNSFAVPQ ISPSSISFKR 300 SRTLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	1e-73	DBB family protein