PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21364.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 294aa    MW: 32970.2 Da    PI: 9.7081
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-18125173355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++GVr+++ +g+WvAeIr p++   r+r++lg+f taeeAa a++ a+  l+g
  PHU21364.1 125 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFNTAEEAAFAYDTAAYLLRG 173
                 8******9.**********955...5**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MRVALPTKFS PSPELELETS VRMKQSHHCT TPCWSSPEML FPMSSSLGHE GQIHYQEAPT  60
PNSTTSWLKM NQTLTNCTST KGFSDYWLST TKTQPMKFTG SSRKSSYIQK SSSSSSVSAS  120
QGKLFRGVRQ RHWGKWVAEI RLPRNRTRVW LGTFNTAEEA AFAYDTAAYL LRGDYAHLNF  180
PHLKNQLKAN SINGSTASLL EAKIRAISAQ SKKTDNNNII DRDDIIISPK GLSNENSTIK  240
SAITQNQESE KLMEINNKVV KNINQENIDG VQLSRMPSLD MDMIWDALLI SDSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.11e-53ERF family protein