PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21514.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 145aa    MW: 17188.1 Da    PI: 4.1084
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.52.7e-141696999
                HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                  +k+g l +p  f+ ++ +g+  e++t  +  ++g++W+v++  + ++   + +++W +Fv++ +L++g  +vF+++g++ef   +++f++
  PHU21514.1 16 PGFKHG-LKIPIGFL-KYlKGQ--EHVTCAVLKRDGKKWRVQV--NVRK---LEEGNWGKFVEEFDLQVGNLLVFSHEGNMEF--EISIFDS 96
                556666.********.554777..7899***************..7777...66899*********************99999..8888886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MKLPPKKPRF FKPILPGFKH GLKIPIGFLK YLKGQEHVTC AVLKRDGKKW RVQVNVRKLE  60
EGNWGKFVEE FDLQVGNLLV FSHEGNMEFE ISIFDSSQCS RAEYMEEDVV EDEVEVDEEE  120
EEEEEYEVEE EDDHEVEEEE DEYEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.17e-13B3 family protein