PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21515.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 135aa    MW: 15373.6 Da    PI: 8.2098
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.95e-1528108387
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                   +++++  ++  ++lp +fa+++g++ ++  +++l+de  r W+v l   + +  + +t GW +F  +ngL +gD   F+l+++
  PHU21515.1  28 VSTIKPYCIRKTEFYLPLDFATSNGLNRQC--EMILKDEAERCWSVWL--GRLGTNFGITCGWTKFRTENGLLVGDAYKFELIKN 108
                 4567899999999**************655..8***************..999999*************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MKKPSNMSPL NAQVSTSTSG DDDHPYFVST IKPYCIRKTE FYLPLDFATS NGLNRQCEMI  60
LKDEAERCWS VWLGRLGTNF GITCGWTKFR TENGLLVGDA YKFELIKNGE IPIAHFHCKF  120
SFNSNVFLSR LSSML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.11e-14B3 family protein