PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21517.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 142aa    MW: 15806.9 Da    PI: 8.3708
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.72.9e-1528109388
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                   +++++  ++  ++lp +fa+++g++ ++  +++l+de  r W+v l   + +  + +t+GW +   +ngL++gD   F+l+++ 
  PHU21517.1  28 VSTIKPYCIRKTEFYLPLDFATSNGLNRQC--EMILKDEAERCWSVSL--GRLGTNFGITRGWTKVRTENGLQVGDAYKFELIKNG 109
                 4567899999999**************655..8***************..999999*************************99863 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MKKPSNMSPL NAQVSTSASC DDDHPYFVST IKPYCIRKTE FYLPLDFATS NGLNRQCEMI  60
LKDEAERCWS VSLGRLGTNF GITRGWTKVR TENGLQVGDA YKFELIKNGE IPIAHFHCSS  120
GRSYAGKLGR TGLHSCTVSD SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.12e-15B3 family protein