PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU21521.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 446aa MW: 50784.4 Da PI: 7.8502

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU21521.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.7	1.3e-10	288	364	5	86
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-S CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldg 86 ++++++ k+ l+lp +f++++g+ ++ +++l de+ rsW++ l +++ ++ + +GW F k ng++ gD+++ + g PHU21521.1 288 TIKPYTIKNPTLYLPLDFVKSNGLMDKS--EMILVDEKQRSWSMWL--GRTGHHFGILRGWTLFKKVNGVQeGGDTLTME--G 364 5689999*************877433..8***********..9999999999***********668999998..3 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MSPMAEIYEV SFYGDQIEVT VTKNAAVVND WINSHRRRLH KLLIGLDIEW LPCFNPEENH 60 PVALLQLCVG QRCLLFQLLH KVAVPRFLVD FLMDPNFKFV GMGVKGDTEK LLRDHKLLVA 120 NTVDLNQLAL SVYGEEVYGK MGLKRMAKEV LGKVMKKPLN VTLSKWDAEE LVYEQIEYAA 180 IDAFVSFEIG KNLFNSIWER QREIEIRGRA VVKRENLNCH YCNCCFFNIH RAYLRGSPSL 240 QAEVKTKKLD AERMSDKGLR LKTSSTTTPE SQLAASTSVD VNSHFISTIK PYTIKNPTLY 300 LPLDFVKSNG LMDKSEMILV DEKQRSWSMW LGRTGHHFGI LRGWTLFKKV NGVQEGGDTL 360 TMEGTTSQTV DSNEIENMRV TLEVMTQALE RLSTEVGSIK GEMMTINGRL EQVESQRNSR 420 PSTPRHVSSS GHDRNFSSTV TLETWL

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MSPMAEIYEV SFYGDQIEVT VTKNAAVVND WINSHRRRLH KLLIGLDIEW LPCFNPEENH  60
PVALLQLCVG QRCLLFQLLH KVAVPRFLVD FLMDPNFKFV GMGVKGDTEK LLRDHKLLVA  120
NTVDLNQLAL SVYGEEVYGK MGLKRMAKEV LGKVMKKPLN VTLSKWDAEE LVYEQIEYAA  180
IDAFVSFEIG KNLFNSIWER QREIEIRGRA VVKRENLNCH YCNCCFFNIH RAYLRGSPSL  240
QAEVKTKKLD AERMSDKGLR LKTSSTTTPE SQLAASTSVD VNSHFISTIK PYTIKNPTLY  300
LPLDFVKSNG LMDKSEMILV DEKQRSWSMW LGRTGHHFGI LRGWTLFKKV NGVQEGGDTL  360
TMEGTTSQTV DSNEIENMRV TLEVMTQALE RLSTEVGSIK GEMMTINGRL EQVESQRNSR  420
PSTPRHVSSS GHDRNFSSTV TLETWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	7e-13	B3 family protein