PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21522.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 200aa    MW: 23114.8 Da    PI: 5.6002
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.12.3e-11941661187
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 + ++  +lp +fa++ g++ ++  +++l+de  r W+v l   + +  + +t+GW +F  +ngL +gD    +l+++
  PHU21522.1  94 FDKADKYLPLDFATSSGLNRQC--EMILKDEAERCWSVWL--VRVGANFGITRGWTKFRTENGLHVGDAYKSELIKN 166
                 4455589**********99655..8***************..8888889*******************988777764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MSEDRSSNHE DSPLWRCRQR WSVLTLLKDE TRLRENPGYY TYVINLSPTI SLDGDVPDRV  60
WFDEFGDHFY DPVEKKFVRS HDVVFFEDQS IEDFDKADKY LPLDFATSSG LNRQCEMILK  120
DEAERCWSVW LVRVGANFGI TRGWTKFRTE NGLHVGDAYK SELIKNGEIP IAHFHCSSGR  180
SYAGKLGRTG IHSCTVSDSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.12e-10B3 family protein