PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21530.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 167aa    MW: 19483.2 Da    PI: 8.2037
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.12.1e-1517891793
                E--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3 17 vlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
                +lpk+fa ++   +  k++  +l+++de+ rsW++kl+++ +   +++++GW++F  +n LkegD ++F+++  +++++ 
  PHU21530.1 17 YLPKQFAFTNclfD--KKC--DLIIRDERQRSWNLKLSHWETE--VYIGDGWRKFLADNFLKEGDHLMFEVVT-NGETPI 89
                79****99998633..345..7***************777776..9************************876.444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MKCSILMCAN GYTPFQYLPK QFAFTNCLFD KKCDLIIRDE RQRSWNLKLS HWETEVYIGD  60
GWRKFLADNF LKEGDHLMFE VVTNGETPIW KFRASDIKTP LLKYRGKFLM LENIAXDVMK  120
KPSNMSPLNA QVSTSTSGDD DHPYFVSTIK PYCIRKTEFH LSDILST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.17e-10B3 family protein