PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21532.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 110aa    MW: 12321 Da    PI: 9.3995
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.12e-103598578
                -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS
          B3  5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78
                ++++++ k+  l+lp +f++++g+  ++  +++l de+ rsW+v++        + + +GW +F k ng+++g 
  PHU21532.1 35 TIKPYAIKNPTLYLPLDFVKSNGLMDKS--EMILVDEKQRSWSVYH--------FGIPRGWTQFQKVNGVQVGY 98
                568999****************877433..8***************........7789*************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MSDKGLRLKT SSTTTPESQL AASTSVDVNS HFISTIKPYA IKNPTLYLPL DFVKSNGLMD  60
KSEMILVDEK QRSWSVYHFG IPRGWTQFQK VNGVQVGYTS LNSPTMAEYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-12B3 family protein