PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21717.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 138aa    MW: 15705.8 Da    PI: 8.8037
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21717.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.1e-201062256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr+++ +g+++AeIrdp++   +   r +lg+f+taeeAa+a+++a+ +l+g+
  PHU21717.1 10 KYRGVRRRP-WGKFAAEIRDPTT---KpsSRQWLGTFDTAEEAARAYDKAAFNLKGH 62
                8********.**********976...24499***********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MQVEKEETIK YRGVRRRPWG KFAAEIRDPT TKPSSRQWLG TFDTAEEAAR AYDKAAFNLK  60
GHLATLNFPI EYYNKLPCPP LYHRNTICPP TNNVNSNIPR GNSPPPSSST EIIELECLDN  120
SVLEDLLGAE YPKITKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-29ERF family protein