PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21796.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 224aa    MW: 25817.3 Da    PI: 8.4494
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.41.1e-0781127455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h + Er RR++ +++++ L +llP       +K++K +i++ A + I +Lq
  PHU21796.1  81 KHMIKERIRREKQKQSYSALHKLLPMG-----TKVEKNAIVQTAARRIEELQ 127
                 68999********************97.....8*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEEFFQVSNW FCDDETYNNF EVNQSAFVSF ESKLSEGFGV YSYGNVSTNH RNMNKRVMEF  60
LKKNWISKNG QVKMEKEKGH KHMIKERIRR EKQKQSYSAL HKLLPMGTKV EKNAIVQTAA  120
RRIEELQKYK ENLKKRNDEL EMMILAENDS NKNEEEFEMA KIKAKVNNPI SGIDSMLEVL  180
KCLKNCGAKA NSIQSSFSHQ EFSTIIEIET KGSSSDAGEP APVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-41bHLH family protein