PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21797.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 156aa    MW: 18429 Da    PI: 9.691
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.96.4e-0780126455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h + Er RR++ ++++  L +llP       +K +K +i++ A   I +Lq
  PHU21797.1  80 KHMIKERIRREKQKQSYLALHKLLPMG-----TKGEKNAIVQTAASRIEELQ 126
                 68999********************97.....79**************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEEFFQVSWF YDDETYNNFV VNQSAFVSFE SKLSDEFGVY SYGSVSTNHR NMNKRAMEFL  60
KKNWISKNGQ VKIEKEKGHK HMIKERIRRE KQKQSYLALH KLLPMGTKGE KNAIVQTAAS  120
RIEELQKYKE NLKKRNDELE MMILAENDSN KISSCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-26bHLH family protein