PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU21805.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ZF-HD

Protein Properties

Length: 810aa MW: 89658.4 Da PI: 6.6605

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU21805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	94.6	8e-30	656	711	3	59
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +vrY+eClkNhAas+GghavDG gEfmps g gt++alkCaAC CH nFHR+e ++ PHU21805.1 656 SVRYQECLKNHAASMGGHAVDGYGEFMPS-GGIGTPEALKCAACSCHQNFHRKEIHD 711 69************************9.7889*****************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 810 aa Download sequence
MQRETFGVME QANTKGDEHI GSGNECGIKE AEALPENSLI QRDVSYISDS VDCVPEVTHS 60 DSEDRVASPV NSETSERRSS VEISCSGFSV LSSAPYGIAG RIPSVAFESS PMCSTDLVPF 120 RGTCLNHNNQ KSYSREWNYG SKSISEAAGW ACETLGQPLF SLPIVEHHEN QKSRLPIEVQ 180 YSASMGYPTL AFPVNHCESL VPGYKRTLIE NFSYRILKMK EIRIDFRAKN LLKVQVKIRH 240 CTSRQILFLF TNEEDYYTIL YKRAFILAGS LMQISWSSPD SHHEVVAFDF AWIQYLNFLL 300 LTVYHICLCD DTKTVLGKRN QNIHPDFRFS DANPVNWNTD TSKLHPSINV LSAAQNIIAR 360 SPYDVMDYSS SMCSTYSVPP FVTDWPFGMT SLNHKNQQPP SRGWNHRNKL TSDISVSCEE 420 TRSNSQAIVL SSSVQQLLKK EVVISYPSDL TEADREKPSL EMPNVSFPTR SPPRSIGSVI 480 QAMSKLKVLD DPNSVNRSVS DSSKPTQQSA TMVNSAETDV LLNADPHKGI KPKAMEKPSV 540 QSVSITAKNF QSHHVTAPAT DEKPQVPAIS QCLSAPSVPP PLPLLGHSAS IAALIFGRNE 600 QAGRESTFPS PSKALDQHSL AQQHNQLNSY KEPNMTVEIA QLQPPSTTSV SETTISVRYQ 660 ECLKNHAASM GGHAVDGYGE FMPSGGIGTP EALKCAACSC HQNFHRKEIH DHPQIADVGS 720 HSTFSPPRNI SSSDSIQNQA PISAPTRQLH HHHSLVDSSP YYSQPPSPKS GPVFSQQGLE 780 RIEPSFILPS YSYEMVNHDT VQNGQQREYS

Sequence ? help Back to Top

Protein Sequence Length: 810 aa Download sequence

MQRETFGVME QANTKGDEHI GSGNECGIKE AEALPENSLI QRDVSYISDS VDCVPEVTHS  60
DSEDRVASPV NSETSERRSS VEISCSGFSV LSSAPYGIAG RIPSVAFESS PMCSTDLVPF  120
RGTCLNHNNQ KSYSREWNYG SKSISEAAGW ACETLGQPLF SLPIVEHHEN QKSRLPIEVQ  180
YSASMGYPTL AFPVNHCESL VPGYKRTLIE NFSYRILKMK EIRIDFRAKN LLKVQVKIRH  240
CTSRQILFLF TNEEDYYTIL YKRAFILAGS LMQISWSSPD SHHEVVAFDF AWIQYLNFLL  300
LTVYHICLCD DTKTVLGKRN QNIHPDFRFS DANPVNWNTD TSKLHPSINV LSAAQNIIAR  360
SPYDVMDYSS SMCSTYSVPP FVTDWPFGMT SLNHKNQQPP SRGWNHRNKL TSDISVSCEE  420
TRSNSQAIVL SSSVQQLLKK EVVISYPSDL TEADREKPSL EMPNVSFPTR SPPRSIGSVI  480
QAMSKLKVLD DPNSVNRSVS DSSKPTQQSA TMVNSAETDV LLNADPHKGI KPKAMEKPSV  540
QSVSITAKNF QSHHVTAPAT DEKPQVPAIS QCLSAPSVPP PLPLLGHSAS IAALIFGRNE  600
QAGRESTFPS PSKALDQHSL AQQHNQLNSY KEPNMTVEIA QLQPPSTTSV SETTISVRYQ  660
ECLKNHAASM GGHAVDGYGE FMPSGGIGTP EALKCAACSC HQNFHRKEIH DHPQIADVGS  720
HSTFSPPRNI SSSDSIQNQA PISAPTRQLH HHHSLVDSSP YYSQPPSPKS GPVFSQQGLE  780
RIEPSFILPS YSYEMVNHDT VQNGQQREYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	2e-21	ZF-HD family protein