PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22112.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 404aa MW: 45498.9 Da PI: 6.4303

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.3	3.3e-09	301	348	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHU22112.1 301 SHSLAERARREKISKKMKYLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 348 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MPGRSTTEAI HLVRRLVEQY RERKKDLHMV FIDLEKAYDK VPREVLWRCL EVSGVPLAYI 60 RAIKDMYDRA KTQVRTAGGD SEHFTVLTGL HQGSTLSPFL FALVMDVLTR RIQGEVPWCS 120 PEASFKGLLG VASALGCELL TSLLVDFFFL LKDKDSHSSF RTSPVETWDI CVAVFALELL 180 PVTIYWGPID NAIWSSPRSE SISVATSVSW EAEASCTWFE VNREEMLTAC PSVDGTVLFY 240 VEEDCITKRP EGKTGEVHSE ITEKSQRGVT GNDSKENSKT SEVQKPDYIH VRARRGQATD 300 SHSLAERARR EKISKKMKYL QDLVPGCNKV TGKAGMLDEI INYVQSLQKQ VEFLSMKLAT 360 LNPRLDLILY THILASNNSN ETNNVTKNEE CNIGDEEKKA GLRI

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MPGRSTTEAI HLVRRLVEQY RERKKDLHMV FIDLEKAYDK VPREVLWRCL EVSGVPLAYI  60
RAIKDMYDRA KTQVRTAGGD SEHFTVLTGL HQGSTLSPFL FALVMDVLTR RIQGEVPWCS  120
PEASFKGLLG VASALGCELL TSLLVDFFFL LKDKDSHSSF RTSPVETWDI CVAVFALELL  180
PVTIYWGPID NAIWSSPRSE SISVATSVSW EAEASCTWFE VNREEMLTAC PSVDGTVLFY  240
VEEDCITKRP EGKTGEVHSE ITEKSQRGVT GNDSKENSKT SEVQKPDYIH VRARRGQATD  300
SHSLAERARR EKISKKMKYL QDLVPGCNKV TGKAGMLDEI INYVQSLQKQ VEFLSMKLAT  360
LNPRLDLILY THILASNNSN ETNNVTKNEE CNIGDEEKKA GLRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18300.1	1e-50	bHLH family protein