PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22153.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HB-other

Protein Properties

Length: 985aa MW: 109339 Da PI: 7.5687

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.4	7.4e-06	64	120	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ +++ F + ++++e +e+++ g+t +qV+ +F +R++ ++ PHU22153.1 64 KRPRDLLNPKTIKYMQSIFSAKDAINKKETREISALFGVTATQVRDFFTAQRTRVRR 120 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 985 aa Download sequence
MEKNQLQLAL ISPPTTSLFD LHKEILYCQI DQLHNIVLQQ CELTGVNPLS QEMAAGALSI 60 KIGKRPRDLL NPKTIKYMQS IFSAKDAINK KETREISALF GVTATQVRDF FTAQRTRVRR 120 FLRFSREKPS ISNVSIEGPC PIPLSSDPSS QTEPVPLNSV DPTCTEEGPS CSTQDEVLTG 180 IEERDRHFVD NILTLMRREE TFSGQVKLMD WILEVQNPSV LYWFLTKGGV MILAAWLGQA 240 AGEEQTSVLH IILKVLCHLP LHKAFPVQMS TILQSVNSLR FYRTPDISNR ARILLARWSK 300 MFAKSQAMKK RNGIKSATDV QDELLLQQSI SEVVGDEIWN SKIEDVEEAH ANLCGTSENS 360 RKLDSPLPVK LLTAPPDDSN KRLKGALVSK TRERRKVQLM EQPSQRTAGR SIGRPAPATQ 420 GRPLSADDIQ KAKMRAQFMQ SKYGKANNDD SSRVKPQAPN GITSSPDDIL HGAPKLQDRP 480 KVDECEKPNS VSSKGSNQLE NHLKLSFDVE EPLPKRCKRM QIPWRKPPEV QLSDTWKVCV 540 GSESKEVDIQ NNRIRRERET IYRTVQEIPL NPKEPWDCEM DPDDTLTPEI PIEQLPDADG 600 AETAGMQLED SGTVAALASM SNGIATTAVP DVELLTILLK NPELVYALTS GQGGNLSSEQ 660 TVRLLDLIKA NGMNALIDQT NLGRDAEKKV EVSLPSPTPS SDPGTSGATL QNFAKNPFSQ 720 RSSMVVPQAN GVPQHTALVH SHEMLQASSV VHQQMPLAPQ LAQQLALLQA AAGSYGNDHR 780 PSPLNPSINQ TVFANPAPAV NISSYSPFGL TEYNLQTATA AAAATRIPVE TYGNIRTSQM 840 PIANVQQRAM SLHSPQMTPP MQQLQTQSQP QMWGAMPGTA LNRGYQENSI PNHYNPHVAA 900 HVEPGLQQAA WRGNNYVEES GFESWSPDNS PVRRQDQVAR WNYQEPGMNM RDNNYRPDWS 960 TSRNPGHFSG CRGPPDNCGI KRWRR

Sequence ? help Back to Top

Protein Sequence Length: 985 aa Download sequence

MEKNQLQLAL ISPPTTSLFD LHKEILYCQI DQLHNIVLQQ CELTGVNPLS QEMAAGALSI  60
KIGKRPRDLL NPKTIKYMQS IFSAKDAINK KETREISALF GVTATQVRDF FTAQRTRVRR  120
FLRFSREKPS ISNVSIEGPC PIPLSSDPSS QTEPVPLNSV DPTCTEEGPS CSTQDEVLTG  180
IEERDRHFVD NILTLMRREE TFSGQVKLMD WILEVQNPSV LYWFLTKGGV MILAAWLGQA  240
AGEEQTSVLH IILKVLCHLP LHKAFPVQMS TILQSVNSLR FYRTPDISNR ARILLARWSK  300
MFAKSQAMKK RNGIKSATDV QDELLLQQSI SEVVGDEIWN SKIEDVEEAH ANLCGTSENS  360
RKLDSPLPVK LLTAPPDDSN KRLKGALVSK TRERRKVQLM EQPSQRTAGR SIGRPAPATQ  420
GRPLSADDIQ KAKMRAQFMQ SKYGKANNDD SSRVKPQAPN GITSSPDDIL HGAPKLQDRP  480
KVDECEKPNS VSSKGSNQLE NHLKLSFDVE EPLPKRCKRM QIPWRKPPEV QLSDTWKVCV  540
GSESKEVDIQ NNRIRRERET IYRTVQEIPL NPKEPWDCEM DPDDTLTPEI PIEQLPDADG  600
AETAGMQLED SGTVAALASM SNGIATTAVP DVELLTILLK NPELVYALTS GQGGNLSSEQ  660
TVRLLDLIKA NGMNALIDQT NLGRDAEKKV EVSLPSPTPS SDPGTSGATL QNFAKNPFSQ  720
RSSMVVPQAN GVPQHTALVH SHEMLQASSV VHQQMPLAPQ LAQQLALLQA AAGSYGNDHR  780
PSPLNPSINQ TVFANPAPAV NISSYSPFGL TEYNLQTATA AAAATRIPVE TYGNIRTSQM  840
PIANVQQRAM SLHSPQMTPP MQQLQTQSQP QMWGAMPGTA LNRGYQENSI PNHYNPHVAA  900
HVEPGLQQAA WRGNNYVEES GFESWSPDNS PVRRQDQVAR WNYQEPGMNM RDNNYRPDWS  960
TSRNPGHFSG CRGPPDNCGI KRWRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-147	HB-other family protein