PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22195.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 100aa    MW: 11545.4 Da    PI: 9.9042
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.51e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l+++  ++G+  +W t +++ g++R+ k+c++rw++yl
       PHU22195.1 14 RGQWSPEEDEILKNYMLKHGTAgSWITLPHKAGLNRCSKSCRLRWLNYL 62
                     89******************99**************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MGRTPCCDKT KVKRGQWSPE EDEILKNYML KHGTAGSWIT LPHKAGLNRC SKSCRLRWLN  60
YLRPDIKLGK FTQEEDNIIH SLYSQLGSRL NLALQPLFIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.15e-46MYB family protein