PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22263.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 175aa MW: 19785.2 Da PI: 10.3877

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22263.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.3e-05	50	72	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H PHU22263.1 50 FECQYCHREFANSQALGGHQNAH 72 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MGESSLHSSL SSSSPRQVKL FGFQVTECDK TTEPPPPPPQ PSPDVEGKRF ECQYCHREFA 60 NSQALGGHQN AHKKERQRTR RAHQIGDHQP RFRQVVPMIN AHAVRSGLIN NNNKSIMSRY 120 YGARLRSQVL SGAPLRFQIH MRQQQLMAVQ NPVDINNNEA DVDLHLRLAP SKDSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06650.1	1e-14	C2H2 family protein