PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22296.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 827aa MW: 95110.8 Da PI: 7.0918

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87	2.8e-27	67	153	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ + ++t+Cka+++vk+++dgkw ++++ ++HnHel p PHU22296.1 67 FYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDTG---SSRRPSLKKTDCKASMHVKRKRDGKWFIHEFIKKHNHELLP 153 9*************************************999877...7888899*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MVDHGDVVQS NVQLTGDMFD AVDKACHSRD GGVSRSPKRN ITGVEENADV EPHDGIEFES 60 HEAAYAFYQE YAKSMGFTTS IKNSRRSKKS KEFIDAKFAC SRYGVTPESD TGSSRRPSLK 120 KTDCKASMHV KRKRDGKWFI HEFIKKHNHE LLPALAYHFR IHRNVKLAEK NNIDILHAVS 180 ERTRKMYVEM SRQCGGSQEI GLLANDLNYQ FDKGRCLSLE EGDAQVMLEY FMHIQKENPY 240 FFYAVDLNED QRLRNLFWID AKSRKDYVSI SDVVFFDTSY MKSNEKMPFA LFIGVNHHCQ 300 PMLLGCALVA DETKPTFVWL MKTWLRAMDG QAPKVIITDQ DKSLKEAIEN IFPCSHHCFA 360 LWHVLERIPE ILAHVVKQHE NFMEKFSKCI FKSATDEQFD LRWWKMVSRF ELQENEWVHT 420 LYEDRKKWVP AYMRGRFMAG MSAAQRSESV SSFFDKYIQK KISLKEFMRQ YGMILQNRYE 480 EEAVADFDTL HKQPALKSPS PWEKQMSTIY THAIFKKFQV EVLGVVGCHP KKEAENGENV 540 TFRVDDCEKD DNFMVTWNES RSDVSCSCLL FEYKGFLCRH AMIVLQMCGL SSIPSQFILK 600 RWTKDATNVL TFEGTERIQT RVQRYNDLCR RAIVLGEEGS LSEESYDIAF RVLDEALKNC 660 VNVNNRSSAL TECSSSAVGL RDLEGDTQGI HFTKTCRKKS TNKKRKVHSE PEAAIVEAED 720 SLQQMDNLTV GGMTLNGYYG THQNMQGLIQ LNLMEPPHDG YYVNQQNMQG LGHLNTATPD 780 HDGFFGSQQS VPGLGHLDFR QPSFTYGLQD EPSLRGAQLH GNNARHA

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MVDHGDVVQS NVQLTGDMFD AVDKACHSRD GGVSRSPKRN ITGVEENADV EPHDGIEFES  60
HEAAYAFYQE YAKSMGFTTS IKNSRRSKKS KEFIDAKFAC SRYGVTPESD TGSSRRPSLK  120
KTDCKASMHV KRKRDGKWFI HEFIKKHNHE LLPALAYHFR IHRNVKLAEK NNIDILHAVS  180
ERTRKMYVEM SRQCGGSQEI GLLANDLNYQ FDKGRCLSLE EGDAQVMLEY FMHIQKENPY  240
FFYAVDLNED QRLRNLFWID AKSRKDYVSI SDVVFFDTSY MKSNEKMPFA LFIGVNHHCQ  300
PMLLGCALVA DETKPTFVWL MKTWLRAMDG QAPKVIITDQ DKSLKEAIEN IFPCSHHCFA  360
LWHVLERIPE ILAHVVKQHE NFMEKFSKCI FKSATDEQFD LRWWKMVSRF ELQENEWVHT  420
LYEDRKKWVP AYMRGRFMAG MSAAQRSESV SSFFDKYIQK KISLKEFMRQ YGMILQNRYE  480
EEAVADFDTL HKQPALKSPS PWEKQMSTIY THAIFKKFQV EVLGVVGCHP KKEAENGENV  540
TFRVDDCEKD DNFMVTWNES RSDVSCSCLL FEYKGFLCRH AMIVLQMCGL SSIPSQFILK  600
RWTKDATNVL TFEGTERIQT RVQRYNDLCR RAIVLGEEGS LSEESYDIAF RVLDEALKNC  660
VNVNNRSSAL TECSSSAVGL RDLEGDTQGI HFTKTCRKKS TNKKRKVHSE PEAAIVEAED  720
SLQQMDNLTV GGMTLNGYYG THQNMQGLIQ LNLMEPPHDG YYVNQQNMQG LGHLNTATPD  780
HDGFFGSQQS VPGLGHLDFR QPSFTYGLQD EPSLRGAQLH GNNARHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein