PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22332.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 286aa    MW: 31166 Da    PI: 8.6774
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-1753102255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  PHU22332.1  53 KFRGVRQRS-WGKWVAEIREPRK---RTRRWLGTFATAEDAARAYDRAAIILYG 102
                 79****999.**********954...5999*******************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MNGTSAGPHH PHPTQDFNPI NQEEKNITAV NDDTSTSNKR GKGKGGPDNN KFKFRGVRQR  60
SWGKWVAEIR EPRKRTRRWL GTFATAEDAA RAYDRAAIIL YGSRAQLNLQ PSGVTTSSAS  120
SSTSSRRSSS SSTTQTLRPL LPRPSGFDFS FSSSAHIPPI SPSTNVLAGG NYVPYEFYPA  180
VQYADMAQNP QQYVPCGDDV YNESATTKAW TVCSDSNPNP GHQQQEDNNQ QYQPQQQQNC  240
LYDEINTLVG SVGPSLSLCS TQMVNAAPVV SDPVAAVGCP XKPKAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-28ERF family protein