PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22590.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 331aa    MW: 37629.3 Da    PI: 7.2408
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.28e-54131421128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePw+L++  ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++ ++
  PHU22590.1  13 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWHLKEicRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSN 110
                 69****************************.9***************954555442556**************************************** PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +g++ktLvfy+grap+g+ktdW+mheyrl
  PHU22590.1 111 SKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 142
                 ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MMMSAAANGQ LSVPPGFRFH PTDEELLYYY LRKKVSYEAI DLDVIREVDL NKLEPWHLKE  60
ICRIGSGPQN EWYFFSHKDK KYPTGTRTNR ATTAGFWKAT GRDKAIYLSN SKRIGMRKTL  120
VFYTGRAPHG QKTDWIMHEY RLDDNTAEVE PLQEDGWVVC RVFKKKNYTT SFQHEIGDDH  180
EERLHFTDQM KAGSAGGLTE PSKQNMQQPQ AACYGYASSF DGSMHLPQLL SPDLSLPCPL  240
PPLSNVNNIE CSPHHNLLRL TSAGPASAFN IPQQHDKFSG DWSFLDKLLA SNQGTLQSQT  300
TTGDLDNPTS TQKYPIFHHH AFDPDLLKFS K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.12e-97NAC family protein