PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22644.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 1057aa    MW: 119563 Da    PI: 6.7389
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22644.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS341.91.1e-10469710521374
        GRAS    1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96  
                  l++lLlecA a+s ++l +a+++L +l ++asp+g +  +R++ayf++A+a+r+ +s+ ++++ l   ++       +  a+++f+++sP++kf+h+
  PHU22644.1  697 LITLLLECAVALSVDNLGEAHRMLLELTQMASPYGtSCAERVVAYFAKAMASRVINSWLGICSPLINYKS-------VHGAFQVFNNISPFIKFAHF 786 
                  5789*******************************6678**********************986644443.......468999************** PP

        GRAS   97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193 
                  t NqaIlea+++ +rvHiiD di+qGlQWpaL++ La+R egpp++ +Tg+g     s e l etg++L++fA++lg++fef++ +  ++ ++++++
  PHU22644.1  787 TSNQAILEAFHRRDRVHIIDVDIMQGLQWPALFHILATRMEGPPHVTMTGMGI----SMEILIETGKQLSNFAKRLGMSFEFHP-IGGKTGEIDISM 878 
                  *****************************************************....9**************************.6999******** PP

        GRAS  194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290 
                  +++ +gEa+a+++v   h+l+d +++  +    +++l+++lsP+vv++veqe+ + ++ Fl+rf+ +l+yys++fdsl a l ++++ r++vE+ ll
  PHU22644.1  879 FKITRGEAIAIHWVQ--HSLYDATGPDWK----TMRLLQELSPRVVTLVEQEIAL-GGCFLDRFVGSLHYYSTVFDSLGAFLQSDDSSRHSVEHGLL 968 
                  **************9..99*999999888....**********************.789************************************** PP

        GRAS  291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 
                    ei n++a  g +r+ +  ++++Wr+ l++ GF +vp+s++ ++qa+l+l++++  +gy++   +g+l lgWkd +L+++SaW+
  PHU22644.1  969 YGEINNILAIGGPARNGE-DKFRHWRSELSKNGFMQVPMSTNSMAQAQLILNMFPpAHGYTLVRGDGTLRLGWKDTSLFTASAWT 1052
                  **************7665.55***************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1057 aa     Download sequence    
MDSARSWFQK FQPRDRIRSS TKKKDSVGGS GREDPQPPMS AEEASNVTKQ RVAAAKQYIE  60
NHYKEQMRNL HERKERRSIL EKKLADADVS EEDQNNVLKF HEKKETEYMR LQRHKMGADD  120
FELLTMIGKG AFGEVRVCRE KTTGHVYAMK KLKKSEMLRR GQVEHVKAER NLLAEVDSNC  180
IVKLYCSFQD DEFLYLIMEY LPGGDMMTLL MRKDTLTEDE ARFYVAETVL AIESIHIHNY  240
IHRDIKPDNL LLDRYGHLRL SDFGLCKPLD CSTLEEKDFA AGDSVHGTSR SDGSSVPKRT  300
QQEQLQHWQK NRRTLAYSTV GTPDYIAPEV LLKKGYGMEC DWWSLGAIMY EMLVGYPPFY  360
SDDPMSTCRK IVNWKSHLKF PEEAKLSSAA EDLISKLLCN VTMRLGSNGA DEIKVHPWFR  420
GIDWDRIYHM DAAFIPEVND ELDTQNFEKF EESETHSQSS SRSGPWRKML SSKDINFVGY  480
TYKNFEIVND YQVPGMAELK KKNTKSKRPS VKALFEDESE GSETSKGSET SKGSGASKGS  540
EARGSGVLHQ HGPLDHSITQ QSNEQWDCAS LGFSGISSAP NTSESRANNP ERNELSQWVE  600
QVTRQLIEDL PENETGVGLQ TNSTGTSTYQ ENIVPSLLGE LRPKKIARRN SSECIGHHHH  660
HQWSSHDDHL ARDDNNRNRN ETIAKGLNGL DDQGLNLITL LLECAVALSV DNLGEAHRML  720
LELTQMASPY GTSCAERVVA YFAKAMASRV INSWLGICSP LINYKSVHGA FQVFNNISPF  780
IKFAHFTSNQ AILEAFHRRD RVHIIDVDIM QGLQWPALFH ILATRMEGPP HVTMTGMGIS  840
MEILIETGKQ LSNFAKRLGM SFEFHPIGGK TGEIDISMFK ITRGEAIAIH WVQHSLYDAT  900
GPDWKTMRLL QELSPRVVTL VEQEIALGGC FLDRFVGSLH YYSTVFDSLG AFLQSDDSSR  960
HSVEHGLLYG EINNILAIGG PARNGEDKFR HWRSELSKNG FMQVPMSTNS MAQAQLILNM  1020
FPPAHGYTLV RGDGTLRLGW KDTSLFTASA WTSPNSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-134GRAS family protein