PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22708.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 313aa    MW: 32814.9 Da    PI: 5.9718
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.5e-09160204554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a +L + v+Y+k L
  PHU22708.1 160 HSIAERLRRERIAERIRALQELVPSvN------KTDRAVMLDEIVDYVKFL 204
                 99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MANNPSEGPS DDFFEQILGF PAYNGAEPNL AGNDPGAIPP AMMLQLNSGD GSGQFSGVGL  60
GVGVGLGGLG GGGFHHGGGG GGGGSFPLGL SLEQGKGGGG FLKMDDVSAP GRRFRDDVVD  120
SRPSSSVKPG FHGQPMPSMP HPPAIRPRVR ARRGQATDPH SIAERLRRER IAERIRALQE  180
LVPSVNKTDR AVMLDEIVDY VKFLRLQVKV LSMSRLGGAG AVAPLVTDIP ISSSVEEESS  240
EGGTNNQPAW EKWSSDGTER QVAKLMEENV GAAMQFLQSK ALCIMPISLA SAIYHSQPPD  300
TSSLVKPETN PPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165170RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-80bHLH family protein