PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22795.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 272aa    MW: 30565.4 Da    PI: 8.304
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.8e-20123173255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta +Aaka+++a+ kl+g
  PHU22795.1 123 HYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTAVDAAKAYDRAAFKLRG 173
                 8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGSPQENCSF DMIRQHLDDI SFMEYYCPEN TLYSQSCESL DQTSVSFETS SNLDDISSFF  60
SSSKTDFGCF EFETKPITSA AASISSNSPK RRSFNERKPS LNIAVPVKPV VVQKVEVVRE  120
KKHYRGVRQR PWGKFAAEIR DPNRKGTRVW LGTFDTAVDA AKAYDRAAFK LRGSKAILNF  180
PLEVANFKQQ NSTVEVPQQV NSSGSKRARE KEELAINKEM KIEAEERVAQ TAPLTPSNWS  240
TIWDSGNGKG IFEVPPLSPL SPHMSYSQLV MI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-42ERF family protein