PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22844.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 361aa MW: 41760.2 Da PI: 8.0346

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	140.3	1.2e-43	32	147	15	129
NAM 15 vveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfyk 110 + +yL+kk++ +k++l +vikevd+yk+ePwdL++ ++ aee+ ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k+ l+g++ktLvfyk PHU22844.1 32 IYYYLRKKITLRKIDL-DVIKEVDLYKIEPWDLQElcRIGAEEQhEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYS-KHDLIGMRKTLVFYK 128 679***********.9***********954555554445**********************************.8899******* PP NAM 111 grapkgektdWvmheyrle 129 grap+g k+dW+mheyrle PHU22844.1 129 GRAPHGLKSDWIMHEYRLE 147 ***************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
LLTFCHINPI LFSAQFRLYS DLCAWIRSAC SIYYYLRKKI TLRKIDLDVI KEVDLYKIEP 60 WDLQELCRIG AEEQHEWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKA IYSKHDLIGM 120 RKTLVFYKGR APHGLKSDWI MHEYRLETDL NGAPQAKGWV VCRVFKKKMV STRKESEEES 180 PNWYENNDPV SFMPDNIGSP KQQHCQSNYP CKKELLDMHY QIPVTPSHHQ QFLQLPLLEN 240 PKFLPAPPST SISVFGINVN NNSHGSSSLQ QSVSVLTREN VHMYPHPDNS TNEQVTDWRV 300 LHKFVASQLS QEEVSKENVY SNTLHGATND SNLVVRDLNK QETVTENNST ASSCSEIDLW 360 K

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

LLTFCHINPI LFSAQFRLYS DLCAWIRSAC SIYYYLRKKI TLRKIDLDVI KEVDLYKIEP  60
WDLQELCRIG AEEQHEWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKA IYSKHDLIGM  120
RKTLVFYKGR APHGLKSDWI MHEYRLETDL NGAPQAKGWV VCRVFKKKMV STRKESEEES  180
PNWYENNDPV SFMPDNIGSP KQQHCQSNYP CKKELLDMHY QIPVTPSHHQ QFLQLPLLEN  240
PKFLPAPPST SISVFGINVN NNSHGSSSLQ QSVSVLTREN VHMYPHPDNS TNEQVTDWRV  300
LHKFVASQLS QEEVSKENVY SNTLHGATND SNLVVRDLNK QETVTENNST ASSCSEIDLW  360
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	4e-93	NAC family protein