PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22891.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 364aa MW: 40963.8 Da PI: 8.2789

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.2	1.1e-16	34	124	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffkv+ dvl l +p +fa+ ++ ++++ led+sg++W+v + ++++g+ +++GW+ F +++gLk g f+vF++++ ++++vv++f++ PHU22891.1 34 FFKVM--VDVLLFEVLHFPPSFAQLVSHL--TDQETYLEDSSGQRWRVGI--CNHDGSLAIRQGWRTFSSEHGLKLGNFLVFHYSQ--CQHFVVQIFER 124 78888..88888888999**9666544..5568***********..***************************976..5556**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MVHPYNEACE MCTHTRTGML MHGQIDPSPI VSSFFKVMVD VLLFEVLHFP PSFAQLVSHL 60 TDQETYLEDS SGQRWRVGIC NHDGSLAIRQ GWRTFSSEHG LKLGNFLVFH YSQCQHFVVQ 120 IFERSGCEKI NFDTGTCTGK KRPRTNSTAT SHDELSPEKW NSTPSVTAVP ESERAGLQPV 180 ATTLASQFGK RARVDMRELK EIAPETRCPP KKLNGKEPKM AVTDGQGYPE AVIGNSQAVK 240 SEPGDAGDRS FRNAVNFACS LRLDDRNFLE LPPNWPHVLA GRKKMRRTII YLKGPDNRPW 300 PIIYHEKFGS KVLVGLWPLF TKAFGLKPGD ECVLQLSDQS KRMFNVHAGA LIDHFFIFLD 360 CPSI

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MVHPYNEACE MCTHTRTGML MHGQIDPSPI VSSFFKVMVD VLLFEVLHFP PSFAQLVSHL  60
TDQETYLEDS SGQRWRVGIC NHDGSLAIRQ GWRTFSSEHG LKLGNFLVFH YSQCQHFVVQ  120
IFERSGCEKI NFDTGTCTGK KRPRTNSTAT SHDELSPEKW NSTPSVTAVP ESERAGLQPV  180
ATTLASQFGK RARVDMRELK EIAPETRCPP KKLNGKEPKM AVTDGQGYPE AVIGNSQAVK  240
SEPGDAGDRS FRNAVNFACS LRLDDRNFLE LPPNWPHVLA GRKKMRRTII YLKGPDNRPW  300
PIIYHEKFGS KVLVGLWPLF TKAFGLKPGD ECVLQLSDQS KRMFNVHAGA LIDHFFIFLD  360
CPSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	5e-12	B3 family protein