PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22903.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 220aa MW: 25285.8 Da PI: 10.4243

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.5	2.1e-08	34	91	47	90
FAR1 47 k..............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k +k+ +++++r++Cka+++ k +d vtk+ leHnHel PHU22903.1 34 KlasqlkyvtvgydkCRKTMVRNQSKRVDCKARVNCKVINDYSCIVTKVILEHNHELD 91 044444555555443345556899********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MGRMMLKKRK AQCMMIAIPK SNTRQVLLKK SAKKLASQLK YVTVGYDKCR KTMVRNQSKR 60 VDCKARVNCK VINDYSCIVT KVILEHNHEL DPTLSYFLPS HRELSRVVKR SLVAHDIAGL 120 RPSKSIRLLE VEDEGPERMS CTPKECRNYI LQQRRLQTLS SDVTALHRFF VDMQPKDKIF 180 FIQYTPTILA DFKMLCGCTH NVRLPTATSA MSYASIQPTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	7	34	KKRKAQCMMIAIPKSNTRQVLLKKSAKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-09	FAR1 family protein