PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22920.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 307aa    MW: 35075 Da    PI: 6.3573
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-2160148289
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  Y+eYA++ GF vrk+k+++ + +  i +++fvC++ g++ee+ +k++k++ +++ tr +C a++  k ++ ++ ++v++++ eHnHe+
  PHU22920.1  60 LYCEYAHSKGFGVRKDKQYYFQGSSVIREKRFVCYRLGEKEERPRKANKASFSHKDTRSNCPAMVSFKSQTpNNPFMVDRFVMEHNHEM 148
                 6*********************************************9************************9***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSTFDKTNNV ESDKELLEDI NVQDEDKKKI QDEVDEDGIP ELKGKMKNQI VKDEEEAYTL  60
YCEYAHSKGF GVRKDKQYYF QGSSVIREKR FVCYRLGEKE ERPRKANKAS FSHKDTRSNC  120
PAMVSFKSQT PNNPFMVDRF VMEHNHEMPK KGHLLRSAHS ITIIKKLVIE NMVNAGIKST  180
ATYSYLIEEA GGDDVLGYSK KDCFNFIHQL MKSKVEVEDV QSVVNKFNNR EASDTHLVDS  240
SDKKAHPKII FCHELLLVEE EASQKGKKKL IGSSGGICDT MMMLGESEEI CDIMMMPGLS  300
VKEYVIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-15FAR1 family protein