PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23026.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 108aa    MW: 12201.9 Da    PI: 11.4867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.21.3e-154391355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr++  +g+Wv+ +r+p   +k+ r++lg+f tae  a+a++  +++l+g
  PHU23026.1 43 YRGVRQRN-SGKWVCKVREP---NKKSRIWLGTFPTAELVARAHDVVALSLRG 91
                9****999.7******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MSAHSNCSPN RAILSDEDVI LASNNPKRSA ESKKFRETRH PAYRGVRQRN SGKWVCKVRE  60
PNKKSRIWLG TFPTAELVAR AHDVVALSLR GRSACINFAD STWRLARP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-49ERF family protein