PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23101.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 132aa    MW: 15732.8 Da    PI: 8.7864
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.87.4e-2339128290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  Y+eYA++ GF vrk+k+++ + +  i +++fvC+++g++ee+ +k++k++ ++  tr +C a++  k+++ ++ ++v++++ eHnHe+a
  PHU23101.1  39 LYCEYAHSKGFGVRKDKQYYFQGSSMIREKRFVCYRHGEKEERPRKSNKASFNHIDTRSNCPAMISFKRQTpNNPFMVDRFVMEHNHEMA 128
                 6*********************************************9*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MQNKDKEKIQ DEVDEDGIIK LEGKMKNEIV KDEEEAYTLY CEYAHSKGFG VRKDKQYYFQ  60
GSSMIREKRF VCYRHGEKEE RPRKSNKASF NHIDTRSNCP AMISFKRQTP NNPFMVDRFV  120
MEHNHEMASP KK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G19990.12e-08FAR1 family protein