PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23260.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 239aa MW: 25552.9 Da PI: 6.5337

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	45.5	1.6e-14	41	68	36	62
zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkkss 62 C rryWt+GG+lrnvPvGgg+rknk+s+ PHU23260.1 41 CpRRYWTEGGSLRNVPVGGGSRKNKRSN 68 549**********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MDTSQWPQGI GVVKGVEPSS KAVVLPDQRK PRPQKEQAIN CPRRYWTEGG SLRNVPVGGG 60 SRKNKRSNNN SNNNNNSSSS NSSSTSSSLS SSKKLLSDLA NPNDLNLTYN PISATAAVAT 120 TSTAGNFSNF SEFMALPLIH PANSTSSFMP NNLYTSSTGL PNLHDLKSSS LNFSLDGFEN 180 GYGSLQGGDQ EAKLFFPMDD LKINVSTAND QFEENREQAA ADQSNGFWNG MLGGGGSSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	7e-13	Dof family protein