PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23285.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 188aa MW: 22124.8 Da PI: 10.2597

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.2	5.2e-26	79	126	5	52
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++l+++++yF+lpi++AAk+L v+lTvLK++CR+++++RWPhRkiksl PHU23285.1 79 LELDEIQRYFHLPITEAAKKLRVGLTVLKKRCRELNVMRWPHRKIKSL 126 899*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MCEDLGSFDL KLLQSPTHVD NNNIPIDVNA KVMPLNVTHD TLGEYQVTNR AFYELNGGPK 60 EFIRKQSNRT GRHKKSYMLE LDEIQRYFHL PITEAAKKLR VGLTVLKKRC RELNVMRWPH 120 RKIKSLQTLI RSVKEMGLTS EVEMLEEHQR MVEQVPEMEL TERTKKLRQA CFKANYKKRR 180 ASMMAAFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	5e-43	Nin-like family protein