PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23303.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family LBD
Protein Properties Length: 181aa    MW: 20600.7 Da    PI: 9.4773
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260766.7e-24797191
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
                +C +C  +++kC ++C +++++p ++ ++++n++++FG +n  +++++++++ r+++++s +yeA+ r++dP++G ++ i+ lqq+l+++k
  PHU23303.1  7 SCPVCHSQKKKCGTKCKFRKHLPPQKDETYKNIEQVFGLANFERFYDRVEPQWRDALIDSYAYEANERIKDPIHGITKDITLLQQRLANTK 97
                6*************************************************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MTRTRKSCPV CHSQKKKCGT KCKFRKHLPP QKDETYKNIE QVFGLANFER FYDRVEPQWR  60
DALIDSYAYE ANERIKDPIH GITKDITLLQ QRLANTKRLG TANVLVSGLA GCTVEFCKHI  120
VVAGAKSLTL NDDRMITQDL LYGNSLIKPN EEFHRDKTIA QVCSESLSKF NSKASIHVLQ  180
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.15e-14LBD family protein