PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23331.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 633aa MW: 70109 Da PI: 4.6795

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.4	1.2e-52	28	156	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp+G+rF+Ptdeelv++yL+ k++g + ++ +vi+evdi+k+ePwdLp + v+++++ew+fF+++d+ky++g+r nrat++gyWkatgkd+++++kkg PHU23331.1 28 LPVGYRFRPTDEELVNHYLRLKINGADSQV-SVIREVDICKLEPWDLPdMsVVESNDNEWFFFCPKDRKYQNGQRLNRATERGYWKATGKDRNITTKKG 125 799**********************999.99**********96347788999************************************* PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLv+y grap+g++t+Wv+heyr+ PHU23331.1 126 AKIGMKKTLVYYIGRAPDGKRTHWVIHEYRA 156 ***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MMAVLPGDNP IAAIPVDKQM GIPPLNSLPV GYRFRPTDEE LVNHYLRLKI NGADSQVSVI 60 REVDICKLEP WDLPDMSVVE SNDNEWFFFC PKDRKYQNGQ RLNRATERGY WKATGKDRNI 120 TTKKGAKIGM KKTLVYYIGR APDGKRTHWV IHEYRATEKS LDGSHPGQGA FVLCRLFRKS 180 DLKQDEHVEN SNLDAEQNAS AVKSPTEDEL SERATPLTVV QPLGDSDKSY AATFPKTKLY 240 GKQIPVESHS HSCIADDTED QMLDITSIPP AQDLEKELGN FCDPSSQPLD WKIFSPLHSQ 300 LQVELGSSYL QAPMNNDISA YPKEDVQFQY GTNALDINDF LDSVFVGSDE FSCEDSGQEL 360 ASHQIDTKNC SITGPMIKDS GSCSESEAEV TQRLAEPDFF DPEMLWGNYD QETAVKNEVN 420 SIAATMLEAR GAPYVSTDHA VGNSGFLQNT YPGHYGRPVS FGASQVPNFL KDGFNSVVSN 480 DSGSGTGIKL RPRPMHNQPD DMQSRPQGTA PRRIRLQMKM QVGPVECCTR PDSSQEAGSH 540 QAVTDGEKAS DEHNPTASDT THEEYEGVSG EVDDLSTRVK DADDSPVQES LDEPLKTVTK 600 LSSSSHIYMT KFLVVASLLV VFIGVWGCIR LYA

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MMAVLPGDNP IAAIPVDKQM GIPPLNSLPV GYRFRPTDEE LVNHYLRLKI NGADSQVSVI  60
REVDICKLEP WDLPDMSVVE SNDNEWFFFC PKDRKYQNGQ RLNRATERGY WKATGKDRNI  120
TTKKGAKIGM KKTLVYYIGR APDGKRTHWV IHEYRATEKS LDGSHPGQGA FVLCRLFRKS  180
DLKQDEHVEN SNLDAEQNAS AVKSPTEDEL SERATPLTVV QPLGDSDKSY AATFPKTKLY  240
GKQIPVESHS HSCIADDTED QMLDITSIPP AQDLEKELGN FCDPSSQPLD WKIFSPLHSQ  300
LQVELGSSYL QAPMNNDISA YPKEDVQFQY GTNALDINDF LDSVFVGSDE FSCEDSGQEL  360
ASHQIDTKNC SITGPMIKDS GSCSESEAEV TQRLAEPDFF DPEMLWGNYD QETAVKNEVN  420
SIAATMLEAR GAPYVSTDHA VGNSGFLQNT YPGHYGRPVS FGASQVPNFL KDGFNSVVSN  480
DSGSGTGIKL RPRPMHNQPD DMQSRPQGTA PRRIRLQMKM QVGPVECCTR PDSSQEAGSH  540
QAVTDGEKAS DEHNPTASDT THEEYEGVSG EVDDLSTRVK DADDSPVQES LDEPLKTVTK  600
LSSSSHIYMT KFLVVASLLV VFIGVWGCIR LYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	5e-87	NAC family protein