PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23417.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 248aa MW: 29332.6 Da PI: 8.7073

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.9e-19	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l+++v+++G+++W++Ia+ ++ gR++k+c++rw++ PHU23417.1 4 RGHWRPHEDEKLKELVAKYGPHNWNAIAENLQ-GRSGKSCRLRWYNQ 49 899***************************.**********96 PP
2	Myb_DNA-binding	55	1.9e-17	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ ++ +G++ W+ Iar ++ gRt++ +k++w+ PHU23417.1 56 RSPFTEEEEERLLSSHRIHGNR-WAMIARLFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MCSRGHWRPH EDEKLKELVA KYGPHNWNAI AENLQGRSGK SCRLRWYNQL DPRINRSPFT 60 EEEEERLLSS HRIHGNRWAM IARLFPGRTD NAVKNHWHVI MSRRCRERSK IYSNRASAAA 120 AAQKSTDQQD NINNIQDMMI RKRSSNNFID HQQLLERYSN CYQFSSYDHN SFYPTEFHFN 180 HLPRHFKMDN QEKNEEVECY DFLQVNNTAG SNKSEVIDQE VEQKRDISPQ SKKAPVRFID 240 FLSVGDSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73410.1	1e-75	MYB family protein