PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23427.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 907aa    MW: 102034 Da    PI: 5.7477
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.4e-192681156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++ +++t++q+++Le+ F+++++p++++r +L++ lgL  rq+k+WFqNrR+++k
  PHU23427.1 26 KKRYHRHTANQIQRLEDIFKECPHPDEKTRLQLSRDLGLAPRQIKFWFQNRRTQMK 81
                678899***********************************************998 PP
2NAM164.44.1e-516677914128
         NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                 G rFhPtdeelv++yLk+k++g+++el ++i+evd+yk+ePw+L  k  + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v s +++++
  PHU23427.1 667 GGRFHPTDEELVNYYLKRKIHGQEIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSS-QNRAI 763
                 88*************************.99**************84335556888*************************************9.8999* PP

         NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                 g+kktLv+y+grap+g +tdWvmheyrl
  PHU23427.1 764 GMKKTLVYYRGRAPQGIRTDWVMHEYRL 791
                 **************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 907 aa     Download sequence    
MEYGGTGGSG GGGADPNDAS DPQRRKKRYH RHTANQIQRL EDIFKECPHP DEKTRLQLSR  60
DLGLAPRQIK FWFQNRRTQM KAQHERADNC ALRTENDKIR CENIAIREAL KNVICPSCGG  120
PPVNEDSYFD EQKLRIENMQ LKEELDKVSS IAAKYIGRPI SQLPPVQPIH LSSLDLSMSS  180
FIGHGPSSLD LDLDLLPGSS SAMPSLAYAT LNLSDMDKSL MADVAGNAME ELIRLVQTNE  240
PLWMKSSSID GRDVLNFDNY DRVFPRTNSH LKNPNVRIEA SRDSGVVIMN GLALVDVFMD  300
ANKWQEFFPT IVSKARTLEV ISSGVMGSRT SSTLQLMYEE LQVLSPLVPT RQFYFLRFCQ  360
QIEQGSWAIV DVSYDIAQEN QYSSTCCKVH RLPSGCLILD MPNGYSKVTW VEHVEVEEKG  420
LIHRLYRDLI HSGLAFGAER WVGTLQRVCE RYACLMVNSN PSHDLGGVIP SPQGKRSMMK  480
LAQRMVRNFC TSVNPSNGHQ WSTISGLNEF EVRATLQKST DPGQPNGVVI SAATTIWLPI  540
PPQHVFNFFR DERTRPQWDV LSNQNPVQEV AHIANGSHSG NCISVLRAYN TSQNNMLILQ  600
ESCIDSSGAL VVYSPVDVPV INIAMSGEDP TYIPLLPSGF TISPDGRQLN AEAASCSSSS  660
NASTIGGGRF HPTDEELVNY YLKRKIHGQE IELDIIPEVD LYKCEPWELA EKSFLPSRDP  720
EWYFFGPRDR KYPNGFRTNR ATRAGYWKST GKDRRVSSQN RAIGMKKTLV YYRGRAPQGI  780
RTDWVMHEYR LDDKECEEIS SIQDSYALCR VFKKNGICSE IEELGQPSIN VPSFEYPLTQ  840
GINNNNNVHD QYQTPSPDVP LASSSCCIEE DEKDDSWMQF ITEDAWCNSS NSPFQGEEIS  900
PLAFTNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein