PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23441.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 186aa    MW: 20822.4 Da    PI: 7.6085
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23441.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.21.7e-27863457
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee..gtaaalkCaACgCHRnFHRrev 57
                   Y+eCl+NhAaslG++a+DGCgEf+ +++++  g + +l+CaACgCHRnFHR+ +
   PHU23441.1  8 DIYRECLRNHAASLGSYATDGCGEFTLDDHNTspGGSFSLNCAACGCHRNFHRKIT 63
                 57************************986655467799***************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MQGDKSNDIY RECLRNHAAS LGSYATDGCG EFTLDDHNTS PGGSFSLNCA ACGCHRNFHR  60
KITCGGASYS NNSRDDREVI IAADYCLATQ ESPAVSERSG KKRFRTKFTT DQKEKMLAFA  120
EKLGWTLQRK DEENETERFC KEVGVITQRL ILVSYCLGLT TWLIGRHICD NLSAQAVTCR  180
QTDMLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.18e-31ZF-HD family protein