PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23498.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 262aa MW: 29914.8 Da PI: 7.6243

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	143.5	1.1e-44	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrF+Ptdee+v +yL +k+ + +l++ ++i+e++i+k++PwdLp + e++ yfFs+++ ky++g+r nrat gyWk tg dk+++++ ++ PHU23498.1 14 LPPGFRFQPTDEEIVFQYLIRKTFSCPLPA-SIIPEINICKHDPWDLPGDI---EQDRYFFSSKEAKYRNGNRVNRATIGGYWKPTGLDKQIICSkRKP 108 79**************************.89***********554...5689*****************************99974555 PP NAM 99 lvglkktLvfykg...rapkgektdWvmheyrl 128 vg+kktLvfykg +++++++tdW+mheyrl PHU23498.1 109 IVGMKKTLVFYKGkttTSHHATRTDWIMHEYRL 141 6******87222456678*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MDKFNFVKDG AIKLPPGFRF QPTDEEIVFQ YLIRKTFSCP LPASIIPEIN ICKHDPWDLP 60 GDIEQDRYFF SSKEAKYRNG NRVNRATIGG YWKPTGLDKQ IICSKRKPIV GMKKTLVFYK 120 GKTTTSHHAT RTDWIMHEYR LAVIPKDSSS NFHGHFKKPS DQNSLVQIGN WVLCHIFLKK 180 RNGKCIQEIL EDDHHDDNYK GHEHSVQIAK PIVYYDFMMA DNLSDGSVTS SCSSSLSNDD 240 STEVSSSPSS LVEHEEATNQ PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	3e-72	NAC family protein