PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23545.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HD-ZIP
Protein Properties Length: 220aa    MW: 25763.7 Da    PI: 5.4568
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.62.1e-182676656
                S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +ft+eq++ Le++F+   ++  +e+ +LA+ lgL+ rqV +WFqN+Ra++k
  PHU23545.1 26 RFTDEQVKLLESMFKLGTKIEPREKLQLARDLGLQPRQVAIWFQNKRARWK 76
                7*************************************************9 PP
2HD-ZIP_I/II115.33.5e-3724113392
  HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                   +r+++eqvklLE++F+  +k+ep++K +lar+Lglqprqva+WFqn+RAR+k+kqlE++y+ Lk+++d+l+++ e+L+ e+e+L  el+
   PHU23545.1  24 AKRFTDEQVKLLESMFKLGTKIEPREKLQLARDLGLQPRQVAIWFQNKRARWKSKQLEHEYRILKSKFDHLNTQFESLKIEKERLLIELE 113
                  69**********************************************************************************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MESEHEKSET PNFKRALNKK CENAKRFTDE QVKLLESMFK LGTKIEPREK LQLARDLGLQ  60
PRQVAIWFQN KRARWKSKQL EHEYRILKSK FDHLNTQFES LKIEKERLLI ELETLNDQLG  120
NNLARGSKSQ DSRDSELHTS PENGFTDLLE LKHCAGCSNS RFGHKSVNEE DDETTEETDK  180
YFTPKEEAEF WNLDELGDNN SLEHWCVGLG SISNSKLWDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.23e-33HD-ZIP family protein